LOC_Os07g10390.1


Description : DNA damage-binding protein 1a OS=Arabidopsis thaliana (sp|q9m0v3|ddb1a_arath : 123.0)


Gene families : OG_01_0005984 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005984_tree ,
OG_02_0007787 (LandPlants) Phylogenetic Tree(s): OG_02_0007787_tree ,
OG_03_0008854 (SeedPlants) Phylogenetic Tree(s): OG_03_0008854_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g10390.1
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AT3G11960 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.04 Archaeplastida
GSVIVT01033428001 No alias Spliceosome-associated protein 130 A OS=Arabidopsis thaliana 0.06 Archaeplastida
Pp3c24_19520V3.1 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.02 Archaeplastida
Solyc10g080630.2.1 No alias Spliceosome-associated protein 130 A OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e033071_P001 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.03 Archaeplastida
GSVIVT01033428001 No alias Spliceosome-associated protein 130 A OS=Arabidopsis thaliana 0.05 LandPlants
Zm00001e033071_P001 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.03 LandPlants
AT3G11960 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.02 SeedPlants
GSVIVT01033428001 No alias Spliceosome-associated protein 130 A OS=Arabidopsis thaliana 0.03 SeedPlants
MA_129261g0030 No alias no hits & (original description: none) 0.01 SeedPlants
Solyc10g080630.2.1 No alias Spliceosome-associated protein 130 A OS=Arabidopsis... 0.02 SeedPlants
Zm00001e033071_P001 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004871 Cleavage/polyA-sp_fac_asu_C 666 915
No external refs found!