Zm00001d012092 (GRMZM5G898314)


Aliases : GRMZM5G898314

Description : 27.3.55 RNA.regulation of transcription.HDA Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots. histone deacetylase 3 (HDA3)


Gene families : OG_01_0001225 (Gene family) Phylogenetic Tree(s): OG0001225_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d012092
Cluster HCCA cluster: Cluster_346

Target Alias Description ECC score Gene Family Method Actions
AT2G27840 HDA13, HDT04, HDT4 histone deacetylase-related / HD-related 0.04 Gene family
AT3G44750 HDA3, ATHD2A, HDT1, HD2A histone deacetylase 3 0.09 Gene family
Cpa|evm.model.tig00000388.65 No alias 29.6 protein.folding Encodes a member of the FKBP-type... 0.03 Gene family
GSVIVT01031404001 No alias 27.3.55 RNA.regulation of transcription.HDA Encodes a... 0.03 Gene family
LOC_Os05g51830 Os05g0597100 27.3.55 RNA.regulation of transcription.HDA Encodes a... 0.11 Gene family
MA_601245g0010 No alias No description available 0.02 Gene family
Smo428242 PACid_15412459 No description available 0.04 Gene family
Solyc09g009030.3.1 Solyc09g009030.3 27.3.55 RNA.regulation of transcription.HDA Encodes a... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!