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  5. LOC_Os07g06960.1

LOC_Os07g06960.1


Description : Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana (sp|q683i9|pp295_arath : 413.0)


Gene families : OG_01_0017863 (Archaeplastida) Phylogenetic Tree(s): OG_01_0017863_tree ,
OG_02_0017696 (LandPlants) Phylogenetic Tree(s): OG_02_0017696_tree ,
OG_03_0017213 (SeedPlants) Phylogenetic Tree(s): OG_03_0017213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g06960.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Zm00001e032872_P001 No alias Pentatricopeptide repeat-containing protein At3g62890... 0.11 Archaeplastida
Zm00001e032872_P001 No alias Pentatricopeptide repeat-containing protein At3g62890... 0.12 LandPlants
Zm00001e032872_P001 No alias Pentatricopeptide repeat-containing protein At3g62890... 0.11 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 518 622
IPR002885 Pentatricopeptide_repeat 344 391
IPR002885 Pentatricopeptide_repeat 490 512
IPR002885 Pentatricopeptide_repeat 245 275
IPR002885 Pentatricopeptide_repeat 418 442
IPR002885 Pentatricopeptide_repeat 215 240
No external refs found!