Zm00001d011900 (GRMZM2G005459)


Aliases : GRMZM2G005459

Description : 27.4 RNA.RNA binding Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity. RNA-binding protein-defense related 1 (RBP-DR1)


Gene families : OG_01_0000751 (Gene family) Phylogenetic Tree(s): OG0000751_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d011900
Cluster HCCA cluster: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011013001 No alias 27.4 RNA.RNA binding Encodes a putative RNA-binding... 0.03 Gene family
LOC_Os01g71200 Os01g0938200 27.4 RNA.RNA binding Encodes a putative RNA-binding... 0.03 Gene family
LOC_Os05g30980 Os05g0373400 27.4 RNA.RNA binding Encodes a putative RNA-binding... 0.05 Gene family
Smo132785 PACid_15407676 33.99 development.unspecified Flowering time control... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 379 449
IPR000504 RRM_dom 132 200
IPR000504 RRM_dom 34 97
No external refs found!