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  5. LOC_Os07g05570.1

LOC_Os07g05570.1


Description : calcium-permeable channel (OSCA)


Gene families : OG_01_0000175 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000175_tree ,
OG_02_0002621 (LandPlants) Phylogenetic Tree(s): OG_02_0002621_tree ,
OG_03_0004566 (SeedPlants) Phylogenetic Tree(s): OG_03_0004566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g05570.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00051600 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.02 Archaeplastida
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Archaeplastida
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.05 Archaeplastida
GSVIVT01021562001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.06 Archaeplastida
LOC_Os03g47070.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Mp5g05890.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Mp8g07950.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Solyc08g076310.3.1 No alias calcium-permeable channel (OSCA) 0.04 Archaeplastida
Zm00001e020766_P002 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
GSVIVT01021562001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.04 LandPlants
Mp8g07950.1 No alias calcium-permeable channel (OSCA) 0.03 LandPlants
GSVIVT01021562001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032880 Csc1_N 5 172
IPR003864 RSN1_7TM 372 642
IPR027815 PHM7_cyt 195 361
No external refs found!