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  5. LOC_Os07g01920.1

LOC_Os07g01920.1


Description : NOG1 LSU processome regulatory GTPase


Gene families : OG_01_0003912 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003912_tree ,
OG_02_0003948 (LandPlants) Phylogenetic Tree(s): OG_02_0003948_tree ,
OG_03_0004055 (SeedPlants) Phylogenetic Tree(s): OG_03_0004055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g01920.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00241220 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
AMTR_s00032p00058660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
AT1G50920 No alias Nucleolar GTP-binding protein 0.05 Archaeplastida
Cpa|evm.model.tig00021432.35 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
MA_89272g0010 No alias NOG1 LSU processome regulatory GTPase 0.02 Archaeplastida
Mp6g16060.1 No alias NOG1 LSU processome regulatory GTPase 0.03 Archaeplastida
Pp3c20_4830V3.1 No alias Nucleolar GTP-binding protein 0.08 Archaeplastida
Smo231970 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Solyc01g081010.4.1 No alias NOG1 LSU processome regulatory GTPase 0.04 Archaeplastida
Zm00001e030762_P002 No alias NOG1 LSU processome regulatory GTPase 0.05 Archaeplastida
Zm00001e036251_P001 No alias NOG1 LSU processome regulatory GTPase 0.06 Archaeplastida
AMTR_s00030p00241220 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 LandPlants
AT1G50920 No alias Nucleolar GTP-binding protein 0.04 LandPlants
MA_89272g0010 No alias NOG1 LSU processome regulatory GTPase 0.02 LandPlants
Mp6g16060.1 No alias NOG1 LSU processome regulatory GTPase 0.03 LandPlants
Pp3c20_4830V3.1 No alias Nucleolar GTP-binding protein 0.06 LandPlants
Smo231970 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 LandPlants
Solyc01g081010.4.1 No alias NOG1 LSU processome regulatory GTPase 0.04 LandPlants
Zm00001e030762_P002 No alias NOG1 LSU processome regulatory GTPase 0.05 LandPlants
Zm00001e036251_P001 No alias NOG1 LSU processome regulatory GTPase 0.06 LandPlants
AMTR_s00030p00241220 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 SeedPlants
AMTR_s00032p00058660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 SeedPlants
AT1G50920 No alias Nucleolar GTP-binding protein 0.04 SeedPlants
MA_89272g0010 No alias NOG1 LSU processome regulatory GTPase 0.02 SeedPlants
Solyc01g081010.4.1 No alias NOG1 LSU processome regulatory GTPase 0.04 SeedPlants
Solyc07g053730.4.1 No alias NOG1 LSU processome regulatory GTPase 0.02 SeedPlants
Zm00001e030762_P002 No alias NOG1 LSU processome regulatory GTPase 0.05 SeedPlants
Zm00001e036251_P001 No alias NOG1 LSU processome regulatory GTPase 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041623 NOG1_N 6 165
IPR010674 NOG1_Rossman_fold_dom 236 292
IPR012973 NOG_C 412 465
No external refs found!