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  5. LOC_Os06g51510.1

LOC_Os06g51510.1


Description : light chain of clathrin triskelion


Gene families : OG_01_0002368 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002368_tree ,
OG_02_0002034 (LandPlants) Phylogenetic Tree(s): OG_02_0002034_tree ,
OG_03_0002134 (SeedPlants) Phylogenetic Tree(s): OG_03_0002134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g51510.1
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00237540 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 Archaeplastida
AT2G20760 No alias Clathrin light chain protein 0.08 Archaeplastida
GSVIVT01033974001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
Mp2g03080.1 No alias light chain of clathrin triskelion 0.04 Archaeplastida
Solyc02g078540.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e013360_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
AMTR_s00029p00237540 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 LandPlants
AT2G20760 No alias Clathrin light chain protein 0.06 LandPlants
GSVIVT01033974001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 LandPlants
Mp2g03080.1 No alias light chain of clathrin triskelion 0.04 LandPlants
Solyc02g078540.4.1 No alias no hits & (original description: none) 0.05 LandPlants
Zm00001e013360_P001 No alias no hits & (original description: none) 0.09 LandPlants
AMTR_s00029p00237540 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 SeedPlants
AT2G20760 No alias Clathrin light chain protein 0.06 SeedPlants
GSVIVT01033974001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 SeedPlants
Solyc02g078540.4.1 No alias no hits & (original description: none) 0.05 SeedPlants
Zm00001e013360_P001 No alias no hits & (original description: none) 0.09 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA Interproscan
CC GO:0030132 clathrin coat of coated pit IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 90 227
No external refs found!