Zm00001d011311 (GRMZM2G050485)

Aliases : GRMZM2G050485

Description : 35.1.5 not ontology.pentatricopeptide (PPR) repeat-containing protein Encodes a member of the E+ subgroup of the PPR protein family, containing the E and E+ motifs following a tandem array of PPR motifs. It also

Gene families : OG_01_0007059 (Gene family) Phylogenetic Tree(s): OG0007059_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d011311
Cluster HCCA cluster: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT5G55740 CRR21 Tetratricopeptide repeat (TPR)-like superfamily protein 0.12 Gene family
LOC_Os01g42280 Os01g0607800 35.1.5 not ontology.pentatricopeptide (PPR)... 0.08 Gene family
MA_62181g0010 No alias No description available 0.02 Gene family
Solyc08g013850.1.1 Solyc08g013850.1 35.1.5 not ontology.pentatricopeptide (PPR)... 0.06 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 477 524
IPR002885 Pentatricopeptide_repeat 315 340
IPR002885 Pentatricopeptide_repeat 213 239
IPR002885 Pentatricopeptide_repeat 444 468
IPR002885 Pentatricopeptide_repeat 343 371
IPR002885 Pentatricopeptide_repeat 242 272
No external refs found!