Zm00001d011096 (GRMZM2G162525)


Aliases : GRMZM2G162525

Description : 33.99 development.unspecified Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus. ARGONAUTE 1 (AGO1)


Gene families : OG_01_0000084 (Gene family) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d011096
Cluster HCCA cluster: Cluster_352

Target Alias Description ECC score Gene Family Method Actions
AT1G48410 AGO1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.04 Gene family
GSVIVT01025868001 No alias 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.02 Gene family
GSVIVT01029383001 No alias 33.99 development.unspecified Encodes an RNA Slicer that... 0.04 Gene family
GSVIVT01031430001 No alias 33.99 development.unspecified ARGONAUTE 5 (AGO5) 0.03 Gene family
LOC_Os01g16870 Os01g0275600 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.02 Gene family
LOC_Os02g58490 Os02g0831600 33.99 development.unspecified Encodes an RNA Slicer that... 0.03 Gene family
MA_10429131g0010 No alias 33.99 development.unspecified Encodes an RNA Slicer that... 0.03 Gene family
Solyc01g008960.3.1 Solyc01g008960.3 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.04 Gene family
Solyc03g098280.3.1 Solyc03g098280.3 33.99 development.unspecified Encodes an RNA Slicer that... 0.03 Gene family
Solyc06g072300.3.1 Solyc06g072300.3 33.99 development.unspecified Encodes an RNA Slicer that... 0.04 Gene family
Solyc07g049500.3.1 Solyc07g049500.3 33.99 development.unspecified Encodes a nuclear... 0.04 Gene family
Solyc09g082830.3.1 Solyc09g082830.3 29.2.3 protein.synthesis.initiation Encodes a member of... 0.02 Gene family
Zm00001d002650 GRMZM2G039455 33.99 development.unspecified Encodes an RNA Slicer that... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR014811 ArgoL1 396 446
IPR032472 ArgoL2 589 634
IPR003165 Piwi 739 1059
IPR003100 PAZ_dom 452 577
IPR024357 Argonaut_Gly-rich 127 232
IPR032473 Argonaute_Mid_dom 645 705
IPR032474 Argonaute_N 251 386
No external refs found!