AMTR_s00075p00081460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00075.19

Description : DNA damage response.DNA repair mechanisms.base excision repair (BER).DNA phosphatase (ZDP)


Gene families : OG_01_0004393 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004393_tree ,
OG_02_0004288 (LandPlants) Phylogenetic Tree(s): OG_02_0004288_tree ,
OG_03_0004038 (SeedPlants) Phylogenetic Tree(s): OG_03_0004038_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00075p00081460
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014196001 No alias DNA damage response.DNA repair mechanisms.base excision... 0.03 Archaeplastida
GSVIVT01014196001 No alias DNA damage response.DNA repair mechanisms.base excision... 0.02 LandPlants
GSVIVT01014196001 No alias DNA damage response.DNA repair mechanisms.base excision... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001510 Znf_PARP 8 81
IPR013954 PNK3P 179 301
No external refs found!