LOC_Os06g43570.1


Description : component beta type-3 of 26S proteasome


Gene families : OG_01_0003815 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003815_tree ,
OG_02_0004658 (LandPlants) Phylogenetic Tree(s): OG_02_0004658_tree ,
OG_03_0004913 (SeedPlants) Phylogenetic Tree(s): OG_03_0004913_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g43570.1
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AT1G21720 PBC1 proteasome beta subunit C1 0.1 Archaeplastida
AT1G77440 PBC2 20S proteasome beta subunit C2 0.04 Archaeplastida
Cpa|evm.model.tig00000826.22 No alias Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
Cre06.g267500 No alias Protein degradation.26S proteasome.20S core... 0.15 Archaeplastida
GSVIVT01008836001 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
Gb_09326 No alias component beta type-3 of 26S proteasome 0.05 Archaeplastida
Gb_29749 No alias component beta type-3 of 26S proteasome 0.07 Archaeplastida
MA_70161g0010 No alias component beta type-3 of 26S proteasome 0.04 Archaeplastida
Mp7g15370.1 No alias component beta type-3 of 26S proteasome 0.08 Archaeplastida
Pp3c7_520V3.1 No alias proteasome beta subunit C1 0.03 Archaeplastida
Smo266913 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
Solyc04g009410.3.1 No alias component beta type-3 of 26S proteasome 0.08 Archaeplastida
Zm00001e013846_P001 No alias component beta type-3 of 26S proteasome 0.09 Archaeplastida
Zm00001e030465_P001 No alias component beta type-3 of 26S proteasome 0.09 Archaeplastida
Zm00001e037487_P001 No alias component beta type-3 of 26S proteasome 0.15 Archaeplastida
AMTR_s00002p00168080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.02 LandPlants
AT1G21720 PBC1 proteasome beta subunit C1 0.1 LandPlants
AT1G77440 PBC2 20S proteasome beta subunit C2 0.04 LandPlants
GSVIVT01008836001 No alias Protein degradation.26S proteasome.20S core... 0.03 LandPlants
Gb_09326 No alias component beta type-3 of 26S proteasome 0.04 LandPlants
Gb_29749 No alias component beta type-3 of 26S proteasome 0.06 LandPlants
MA_70161g0010 No alias component beta type-3 of 26S proteasome 0.04 LandPlants
Mp7g15370.1 No alias component beta type-3 of 26S proteasome 0.08 LandPlants
Pp3c7_520V3.1 No alias proteasome beta subunit C1 0.03 LandPlants
Smo266913 No alias Protein degradation.26S proteasome.20S core... 0.04 LandPlants
Solyc04g009410.3.1 No alias component beta type-3 of 26S proteasome 0.08 LandPlants
Zm00001e013846_P001 No alias component beta type-3 of 26S proteasome 0.08 LandPlants
Zm00001e030465_P001 No alias component beta type-3 of 26S proteasome 0.07 LandPlants
Zm00001e037487_P001 No alias component beta type-3 of 26S proteasome 0.14 LandPlants
AMTR_s00002p00168080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.02 SeedPlants
AT1G21720 PBC1 proteasome beta subunit C1 0.1 SeedPlants
AT1G77440 PBC2 20S proteasome beta subunit C2 0.04 SeedPlants
GSVIVT01008836001 No alias Protein degradation.26S proteasome.20S core... 0.03 SeedPlants
Gb_09326 No alias component beta type-3 of 26S proteasome 0.04 SeedPlants
Gb_29749 No alias component beta type-3 of 26S proteasome 0.06 SeedPlants
MA_70161g0010 No alias component beta type-3 of 26S proteasome 0.04 SeedPlants
Solyc04g009410.3.1 No alias component beta type-3 of 26S proteasome 0.08 SeedPlants
Zm00001e013846_P001 No alias component beta type-3 of 26S proteasome 0.07 SeedPlants
Zm00001e030465_P001 No alias component beta type-3 of 26S proteasome 0.07 SeedPlants
Zm00001e037487_P001 No alias component beta type-3 of 26S proteasome 0.13 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 120 296
No external refs found!