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  5. LOC_Os06g41384.2

LOC_Os06g41384.2


Description : C3H zinc finger transcription factor


Gene families : OG_01_0001099 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001099_tree ,
OG_02_0001093 (LandPlants) Phylogenetic Tree(s): OG_02_0001093_tree ,
OG_03_0001843 (SeedPlants) Phylogenetic Tree(s): OG_03_0001843_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g41384.2
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
Zm00001e006629_P001 No alias C3H zinc finger transcription factor 0.04 Archaeplastida
Zm00001e030509_P002 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
Zm00001e037586_P002 No alias C3H zinc finger transcription factor 0.07 Archaeplastida
Zm00001e006629_P001 No alias C3H zinc finger transcription factor 0.03 LandPlants
Zm00001e030509_P002 No alias C3H zinc finger transcription factor 0.02 LandPlants
Zm00001e037586_P002 No alias C3H zinc finger transcription factor 0.07 LandPlants
Zm00001e006629_P001 No alias C3H zinc finger transcription factor 0.03 SeedPlants
Zm00001e030509_P002 No alias C3H zinc finger transcription factor 0.02 SeedPlants
Zm00001e037586_P002 No alias C3H zinc finger transcription factor 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 169 231
IPR000571 Znf_CCCH 34 58
IPR000571 Znf_CCCH 260 285
No external refs found!