LOC_Os06g40710.1


Description : G2-like GARP transcription factor


Gene families : OG_01_0000027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000027_tree ,
OG_02_0000069 (LandPlants) Phylogenetic Tree(s): OG_02_0000069_tree ,
OG_03_0000042 (SeedPlants) Phylogenetic Tree(s): OG_03_0000042_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g40710.1
Cluster HCCA: Cluster_357

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00190540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT3G24120 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Gb_17469 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_15920g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Mp4g01560.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Smo438638 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc06g066180.4.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc10g083340.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g098370.2.1 No alias G2-like GARP transcription factor. transcription factor (PHR1) 0.04 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Mp4g01560.1 No alias G2-like GARP transcription factor 0.05 LandPlants
Smo438638 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
Solyc12g098370.2.1 No alias G2-like GARP transcription factor. transcription factor (PHR1) 0.04 LandPlants
AMTR_s00089p00057120 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
GSVIVT01022645001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
GSVIVT01033528001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
Solyc06g066180.4.1 No alias G2-like GARP transcription factor 0.02 SeedPlants
Solyc12g098370.2.1 No alias G2-like GARP transcription factor. transcription factor (PHR1) 0.04 SeedPlants
Zm00001e004300_P003 No alias G2-like GARP transcription factor 0.02 SeedPlants
Zm00001e009653_P001 No alias G2-like GARP transcription factor 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 133 179
IPR001005 SANT/Myb 50 100
No external refs found!