Zm00001d010175 (GRMZM2G457562)


Aliases : GRMZM2G457562

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein ?//CONTAINS one AP2 domain. There are 7 members in this subfamily.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d010175
Cluster HCCA cluster: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.07 Gene family
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.02 Gene family
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01005747001 No alias No description available 0.03 Gene family
GSVIVT01009801001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
LOC_Os02g43820 Os02g0655200 No description available 0.04 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.03 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os04g46250 Os04g0547600 No description available 0.09 Gene family
LOC_Os05g36100 Os05g0437050,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.12 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g07030 Os06g0166400 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os08g45110 Os08g0565200 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.08 Gene family
LOC_Os09g11480 Os09g0287000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_3405g0010 No alias No description available 0.02 Gene family
MA_67707g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc03g093550.1.1 Solyc03g093550.1 No description available 0.02 Gene family
Solyc03g093560.1.1 Solyc03g093560.1 No description available 0.04 Gene family
Solyc04g050750.1.1 Solyc04g050750.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.08 Gene family
Solyc07g053740.1.1 Solyc07g053740.1 No description available 0.02 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.02 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.02 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d026447 GRMZM2G421033 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d032295 GRMZM2G061487 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d051239 GRMZM2G300924 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 19 68
No external refs found!