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  5. Zm00001d009850

Zm00001d009850 (GRMZM2G088088)


Aliases : GRMZM2G088088

Description : 29.3.1 protein.targeting.nucleus Encodes importin alpha involved in nuclear import. AT-IMP


Gene families : OG_01_0000716 (Gene family) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d009850
Cluster HCCA cluster: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
AT3G06720 IMPA-1, IMPA1,... importin alpha isoform 1 0.03 Gene family
AT4G16143 IMPA-2 importin alpha isoform 2 0.02 Gene family
Cpa|evm.model.tig00021721.27 No alias 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.03 Gene family
Cre04.g215850 No alias 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.03 Gene family
GSVIVT01028079001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.02 Gene family
GSVIVT01031205001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.02 Gene family
GSVIVT01035047001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.08 Gene family
Smo266556 PACid_15409102 No description available 0.02 Gene family
Solyc01g100720.3.1 Solyc01g100720.3 29.3.1 protein.targeting.nucleus Protein interacts with... 0.03 Gene family
Zm00001d008345 GRMZM2G088231 29.3.1 protein.targeting.nucleus Protein interacts with... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002652 Importin-a_IBB 12 96
IPR032413 Arm_3 453 499
IPR000225 Armadillo 149 184
IPR000225 Armadillo 400 437
IPR000225 Armadillo 241 269
IPR000225 Armadillo 187 228
IPR000225 Armadillo 107 147
IPR000225 Armadillo 314 354
IPR000225 Armadillo 356 395
IPR000225 Armadillo 272 310
No external refs found!