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  5. LOC_Os06g35370.1

LOC_Os06g35370.1


Description : Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize : 549.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 300.9)


Gene families : OG_01_0000535 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000535_tree ,
OG_02_0000281 (LandPlants) Phylogenetic Tree(s): OG_02_0000281_tree ,
OG_03_0000124 (SeedPlants) Phylogenetic Tree(s): OG_03_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g35370.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g40890.1 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.03 Archaeplastida
Zm00001e025021_P003 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 Archaeplastida
Zm00001e030536_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042518_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g40890.1 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.03 LandPlants
Zm00001e025021_P003 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 LandPlants
Zm00001e030536_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e042518_P001 No alias no hits & (original description: none) 0.03 LandPlants
AMTR_s00019p00055210 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectin lyase 0.02 SeedPlants
AMTR_s00019p00057300 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 SeedPlants
AMTR_s00019p00130680 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectin lyase 0.02 SeedPlants
AT1G02790 PGA4 polygalacturonase 4 0.02 SeedPlants
LOC_Os06g40890.1 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.03 SeedPlants
Zm00001e014066_P002 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.02 SeedPlants
Zm00001e025021_P003 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 SeedPlants
Zm00001e030536_P001 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e042518_P001 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 72 401
No external refs found!