Zm00001d009622 (GRMZM2G100982)

Aliases : GRMZM2G100982

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein

Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Zm00001d009622
Cluster	HCCA cluster: Cluster_218

Target	Alias	Description	ECC score	Gene Family Method
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.04	Gene family
AT5G50080	ERF110	ethylene response factor 110	0.03	Gene family
LOC_Os02g13710	Os02g0231000	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
LOC_Os04g46250	Os04g0547600	No description available	0.04	Gene family
LOC_Os05g36100	Os05g0437050,...	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
LOC_Os06g06540	Os06g0160500	No description available	0.03	Gene family
LOC_Os06g11940	Os06g0223100	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
LOC_Os06g40150	Os06g0604000	17.5.2 hormone metabolism.ethylene.signal transduction...	0.02	Gene family
LOC_Os08g45110	Os08g0565200	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
LOC_Os09g28440	Os09g0457900	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
MA_115502g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
MA_15251g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
MA_179692g0020	No alias	No description available	0.02	Gene family
MA_214063g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
MA_27309g0010	No alias	No description available	0.02	Gene family
MA_42369g0010	No alias	No description available	0.02	Gene family
Solyc01g090340.2.1	Solyc01g090340.2	No description available	0.04	Gene family
Solyc01g090370.2.1	Solyc01g090370.2	No description available	0.03	Gene family
Solyc03g120840.2.1	Solyc03g120840.2	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
Solyc04g007170.3.1	Solyc04g007170.3	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
Solyc04g050750.1.1	Solyc04g050750.1	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Solyc04g054910.3.1	Solyc04g054910.3	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Solyc06g066540.1.1	Solyc06g066540.1	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.05	Gene family
Solyc06g068830.2.1	Solyc06g068830.2	No description available	0.03	Gene family
Solyc08g078180.1.1	Solyc08g078180.1	No description available	0.02	Gene family
Solyc09g089910.1.1	Solyc09g089910.1	No description available	0.02	Gene family
Solyc12g009490.2.1	Solyc12g009490.2	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.05	Gene family
Zm00001d002760	GRMZM2G475678	No description available	0.02	Gene family
Zm00001d002761	GRMZM5G805505	No description available	0.02	Gene family
Zm00001d015759	GRMZM2G085678	17.5.2 hormone metabolism.ethylene.signal transduction...	0.05	Gene family
Zm00001d031673	GRMZM2G309731	No description available	0.02	Gene family
Zm00001d038320	GRMZM2G100727	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d043491	GRMZM2G474326	No description available	0.02	Gene family
Zm00001d045204	GRMZM2G301860	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d046501	No alias	17.5.2 hormone metabolism.ethylene.signal transduction...	0.05	Gene family
Zm00001d049889	GRMZM2G156737	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	109	158

External Links

No external refs found!

Zm00001d009622 (GRMZM2G100982)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation