Zm00001d009613 (GRMZM2G157156)


Aliases : GRMZM2G157156

Description : 29.5.5 protein.degradation.serine protease Encodes a DegP protease nuclear gene encoding chloroplast-targeted protease that can degrade two lumenal proteins, plastocyanin and OE33, suggesting a role as a general-purpose protease in the thylakoid lumen. Involved in the degradation of D1 protein of PS II, hence participating in the repair of PS II damages caused by photoinhibition. DegP protease 1 (DEGP1)


Gene families : OG_01_0001247 (Gene family) Phylogenetic Tree(s): OG0001247_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d009613
Cluster HCCA cluster: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT3G27925 DEGP1, Deg1 DegP protease 1 0.1 Gene family
Cre01.g028350 No alias No description available 0.02 Gene family
Cre02.g088400 No alias 29.5.5 protein.degradation.serine protease Encodes a... 0.04 Gene family
GSVIVT01034494001 No alias 29.5.5 protein.degradation.serine protease Encodes a... 0.05 Gene family
LOC_Os04g38640 Os04g0459900 No description available 0.07 Gene family
MA_10426639g0010 No alias 29.5.5 protein.degradation.serine protease Encodes a... 0.03 Gene family
MA_10431940g0010 No alias 29.5.5 protein.degradation.serine protease Encodes a... 0.03 Gene family
MA_950571g0010 No alias No description available 0.02 Gene family
Smo176144 PACid_15421177 No description available 0.02 Gene family
Solyc02g067360.3.1 Solyc02g067360.3 No description available 0.04 Gene family
Solyc02g086830.3.1 Solyc02g086830.3 29.5.5 protein.degradation.serine protease Encodes a... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001478 PDZ 357 453
No external refs found!