1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g31210.1

LOC_Os06g31210.1


Description : methionine-tRNA ligase


Gene families : OG_01_0002980 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002980_tree ,
OG_02_0003155 (LandPlants) Phylogenetic Tree(s): OG_02_0003155_tree ,
OG_03_0003494 (SeedPlants) Phylogenetic Tree(s): OG_03_0003494_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g31210.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00209p00023450 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
AT4G13780 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.04 Archaeplastida
Cpa|evm.model.tig00020614.25 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Cre02.g087950 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
GSVIVT01020924001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Gb_31125 No alias methionine-tRNA ligase 0.02 Archaeplastida
MA_10427001g0020 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_10436199g0010 No alias methionine-tRNA ligase 0.03 Archaeplastida
Mp6g20530.1 No alias methionine-tRNA ligase 0.11 Archaeplastida
Pp3c13_2300V3.1 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.11 Archaeplastida
Smo164891 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 Archaeplastida
Zm00001e000847_P001 No alias methionine-tRNA ligase 0.14 Archaeplastida
Zm00001e038714_P001 No alias methionine-tRNA ligase 0.14 Archaeplastida
AMTR_s00209p00023450 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 LandPlants
AT4G13780 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.04 LandPlants
GSVIVT01020924001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 LandPlants
Gb_31125 No alias methionine-tRNA ligase 0.02 LandPlants
MA_10427001g0020 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.02 LandPlants
MA_10436199g0010 No alias methionine-tRNA ligase 0.02 LandPlants
Mp6g20530.1 No alias methionine-tRNA ligase 0.11 LandPlants
Pp3c13_2300V3.1 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.12 LandPlants
Smo164891 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 LandPlants
Zm00001e000847_P001 No alias methionine-tRNA ligase 0.12 LandPlants
Zm00001e038714_P001 No alias methionine-tRNA ligase 0.13 LandPlants
AMTR_s00209p00023450 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 SeedPlants
AT4G13780 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.04 SeedPlants
GSVIVT01020924001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 SeedPlants
Gb_31125 No alias methionine-tRNA ligase 0.02 SeedPlants
MA_10427001g0020 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.02 SeedPlants
MA_10436199g0010 No alias methionine-tRNA ligase 0.02 SeedPlants
Zm00001e000847_P001 No alias methionine-tRNA ligase 0.12 SeedPlants
Zm00001e038714_P001 No alias methionine-tRNA ligase 0.13 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 18 412
IPR002547 tRNA-bd_dom 645 739
No external refs found!