LOC_Os06g30090.1


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g30090.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT1G68240 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp5g09710.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Mp6g21470.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c16_21590V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo419388 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 LandPlants
LOC_Os12g32400.1 No alias transcription factor (bHLH) 0.03 LandPlants
Mp5g09710.1 No alias transcription factor (bHLH) 0.01 LandPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.01 LandPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.01 LandPlants
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 LandPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 SeedPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 SeedPlants
LOC_Os12g32400.1 No alias transcription factor (bHLH) 0.03 SeedPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.01 SeedPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 198 245
No external refs found!