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  5. LOC_Os06g26234.1

LOC_Os06g26234.1


Description : starch branching enzyme


Gene families : OG_01_0001006 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001006_tree ,
OG_02_0008440 (LandPlants) Phylogenetic Tree(s): OG_02_0008440_tree ,
OG_03_0009322 (SeedPlants) Phylogenetic Tree(s): OG_03_0009322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g26234.1
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.03 Archaeplastida
Pp3c1_1810V3.1 No alias Alpha amylase family protein 0.04 Archaeplastida
Solyc07g064830.3.1 No alias starch branching enzyme 0.05 Archaeplastida
Zm00001e027838_P001 No alias starch branching enzyme 0.03 Archaeplastida
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.03 LandPlants
Pp3c1_1810V3.1 No alias Alpha amylase family protein 0.03 LandPlants
Solyc07g064830.3.1 No alias starch branching enzyme 0.05 LandPlants
Zm00001e027838_P001 No alias starch branching enzyme 0.03 LandPlants
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.03 SeedPlants
Solyc07g064830.3.1 No alias starch branching enzyme 0.05 SeedPlants
Zm00001e027838_P001 No alias starch branching enzyme 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 128 191
IPR006048 A-amylase/branching_C 804 897
IPR006047 Glyco_hydro_13_cat_dom 431 505
No external refs found!