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  5. Zm00001d008922

Zm00001d008922 (GRMZM2G167718)


Aliases : GRMZM2G167718

Description : 27.3.52 RNA.regulation of transcription.Global transcription factor group This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation. global transcription factor group E4 (GTE4)


Gene families : OG_01_0000231 (Gene family) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d008922
Cluster HCCA cluster: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT1G06230 GTE4 global transcription factor group E4 0.02 Gene family
AT3G01770 ATBET10, BET10 bromodomain and extraterminal domain protein 10 0.02 Gene family
GSVIVT01038522001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.05 Gene family
LOC_Os02g38980 Os02g0601800 35.2 not assigned.unknown Encodes NPX1 (Nuclear Protein... 0.05 Gene family
LOC_Os07g32420 Os07g0507700 27.3.52 RNA.regulation of transcription.Global... 0.05 Gene family
MA_87057g0010 No alias 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
Solyc07g062660.3.1 Solyc07g062660.3 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Zm00001d024251 GRMZM2G006083 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
Zm00001d026333 GRMZM2G396846 27.3.52 RNA.regulation of transcription.Global... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027353 NET_dom 300 361
IPR001487 Bromodomain 133 217
No external refs found!