Zm00001d008793 (GRMZM2G516301)


Aliases : GRMZM2G516301

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group II-c WRKY DNA-binding protein 50 (WRKY50)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d008793
Cluster HCCA cluster: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT2G40740 WRKY55, ATWRKY55 WRKY DNA-binding protein 55 0.03 Gene family
AT4G23810 WRKY53, ATWRKY53 WRKY family transcription factor 0.03 Gene family
GSVIVT01015952001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01019419001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01022245001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os01g09100 Os01g0186000 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os01g14440 Os01g0246700 No description available 0.06 Gene family
LOC_Os01g18584 Os01g0289600 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os01g46800 Os01g0656400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g54600 Os01g0750100 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os01g74140 Os01g0972800 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os02g26430 Os02g0462800 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os03g55080 Os03g0758000,... 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os05g09020 Os05g0183100 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os05g49210 Os05g0567200 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_10432362g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_20468g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_558583g0010 No alias No description available 0.04 Gene family
Solyc01g104550.3.1 Solyc01g104550.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc02g032950.3.1 Solyc02g032950.3 No description available 0.03 Gene family
Solyc03g007380.2.1 Solyc03g007380.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc03g095770.3.1 Solyc03g095770.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc03g116890.3.1 Solyc03g116890.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d034888 GRMZM2G083717 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Zm00001d037854 GRMZM2G127064 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 121 177
No external refs found!