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  5. LOC_Os06g19680.1

LOC_Os06g19680.1


Description : ubiquitin ligase component HRD1 of ER-associated protein degradation (ERAD) machinery


Gene families : OG_01_0005035 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005035_tree ,
OG_02_0005501 (LandPlants) Phylogenetic Tree(s): OG_02_0005501_tree ,
OG_03_0005735 (SeedPlants) Phylogenetic Tree(s): OG_03_0005735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g19680.1
Cluster HCCA: Cluster_382

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024416001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_05778 No alias ubiquitin ligase component HRD1 of ER-associated protein... 0.02 Archaeplastida
Mp1g18190.1 No alias ubiquitin ligase component HRD1 of ER-associated protein... 0.02 Archaeplastida
Solyc03g096930.4.1 No alias ubiquitin ligase component HRD1 of ER-associated protein... 0.05 Archaeplastida
Zm00001e009130_P003 No alias ubiquitin ligase component HRD1 of ER-associated protein... 0.02 Archaeplastida
GSVIVT01024416001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
Mp1g18190.1 No alias ubiquitin ligase component HRD1 of ER-associated protein... 0.02 LandPlants
Solyc03g096930.4.1 No alias ubiquitin ligase component HRD1 of ER-associated protein... 0.05 LandPlants
Zm00001e009130_P003 No alias ubiquitin ligase component HRD1 of ER-associated protein... 0.02 LandPlants
GSVIVT01024416001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
Solyc03g096930.4.1 No alias ubiquitin ligase component HRD1 of ER-associated protein... 0.05 SeedPlants
Zm00001e009130_P003 No alias ubiquitin ligase component HRD1 of ER-associated protein... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 291 330
No external refs found!