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  5. LOC_Os06g17410.1

LOC_Os06g17410.1


Description : transcription factor (DOF)


Gene families : OG_01_0000060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000060_tree ,
OG_02_0000025 (LandPlants) Phylogenetic Tree(s): OG_02_0000025_tree ,
OG_03_0070723 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g17410.1
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00038440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT5G62430 CDF1 cycling DOF factor 1 0.03 Archaeplastida
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Gb_09675 No alias transcription factor (DOF) 0.04 Archaeplastida
Gb_20144 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_2430g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g070960.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e041944_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
AT5G62430 CDF1 cycling DOF factor 1 0.03 LandPlants
GSVIVT01007992001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
Gb_09675 No alias transcription factor (DOF) 0.04 LandPlants
Gb_12877 No alias transcription factor (DOF) 0.02 LandPlants
Gb_20144 No alias transcription factor (DOF) 0.02 LandPlants
LOC_Os10g35300.2 No alias transcription factor (DOF) 0.04 LandPlants
MA_16692g0010 No alias transcription factor (DOF) 0.02 LandPlants
MA_2430g0010 No alias no hits & (original description: none) 0.03 LandPlants
Mp1g18540.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc04g070960.3.1 No alias transcription factor (DOF) 0.03 LandPlants
Zm00001e041944_P001 No alias transcription factor (DOF) 0.05 LandPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 29 84
No external refs found!