Zm00001d008345 (GRMZM2G088231)


Aliases : GRMZM2G088231

Description : 29.3.1 protein.targeting.nucleus Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. importin alpha isoform 2 (IMPA-2)


Gene families : OG_01_0000716 (Gene family) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d008345
Cluster HCCA cluster: Cluster_328

Target Alias Description ECC score Gene Family Method Actions
AT1G02690 IMPA-6 importin alpha isoform 6 0.02 Gene family
AT4G02150 IMPA-3, MOS6, ATIMPALPHA3 ARM repeat superfamily protein 0.04 Gene family
Cpa|evm.model.tig00021721.27 No alias 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.02 Gene family
GSVIVT01028079001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.02 Gene family
GSVIVT01035047001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.03 Gene family
LOC_Os01g14950 Os01g0253300 29.3.1 protein.targeting.nucleus Protein interacts with... 0.04 Gene family
MA_138621g0010 No alias 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.02 Gene family
Solyc08g041890.3.1 Solyc08g041890.3 29.3.1 protein.targeting.nucleus Protein interacts with... 0.02 Gene family
Zm00001d009850 GRMZM2G088088 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.03 Gene family
Zm00001d037606 GRMZM2G009845 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032413 Arm_3 453 500
IPR002652 Importin-a_IBB 12 91
IPR000225 Armadillo 186 227
IPR000225 Armadillo 271 309
IPR000225 Armadillo 313 353
IPR000225 Armadillo 144 183
IPR000225 Armadillo 240 268
IPR000225 Armadillo 355 394
IPR000225 Armadillo 399 436
IPR000225 Armadillo 102 142
No external refs found!