LOC_Os06g15700.1


Description : component ATG2 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG_01_0005528 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005528_tree ,
OG_02_0004882 (LandPlants) Phylogenetic Tree(s): OG_02_0004882_tree ,
OG_03_0006196 (SeedPlants) Phylogenetic Tree(s): OG_03_0006196_tree

Sequence : coding (download), protein var csrf_token = "IjcxNDUxMTNkZWE0MDdlNmEzOWMxNjM3NjdhNDc2ZTYyZjQzYTU3ZTIi.FIiPOg.Crz606B1XEnS2joVcFrzDXCs4H0"; $.ajaxSetup({ beforeSend: function(xhr, settings) { if (!/^(GET|HEAD|OPTIONS|TRACE)$/i.test(settings.type) && !this.crossDomain) { xhr.setRequestHeader("X-CSRFToken", csrf_token); } } }); (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g15700.1
Cluster HCCA: Cluster_368

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00106330 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 Archaeplastida
AT3G19190 ATATG2, ATG2 autophagy 2 0.05 Archaeplastida
Cre09.g408950 No alias No description available 0.02 Archaeplastida
GSVIVT01031759001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.1 Archaeplastida
Gb_39311 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.07 Archaeplastida
MA_10433793g0030 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Pp3c13_15610V3.1 No alias autophagy 2 0.1 Archaeplastida
Solyc01g108160.3.1 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.08 Archaeplastida
Zm00001e030944_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.1 Archaeplastida
Zm00001e036789_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 Archaeplastida
AMTR_s00126p00106330 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 LandPlants
AT3G19190 ATATG2, ATG2 autophagy 2 0.04 LandPlants
GSVIVT01031759001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.09 LandPlants
Gb_39311 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 LandPlants
MA_10433793g0030 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
Pp3c13_15610V3.1 No alias autophagy 2 0.08 LandPlants
Solyc01g108160.3.1 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.08 LandPlants
Zm00001e030944_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.07 LandPlants
Zm00001e036789_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 LandPlants
AMTR_s00126p00106330 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 SeedPlants
AT3G19190 ATATG2, ATG2 autophagy 2 0.03 SeedPlants
GSVIVT01031759001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.09 SeedPlants
Gb_39311 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 SeedPlants
MA_10433793g0030 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants
Solyc01g108160.3.1 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.08 SeedPlants
Zm00001e030944_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.07 SeedPlants
Zm00001e036789_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR026885 ATG2_CAD_motif 1211 1273
IPR015412 Autophagy-rel_C 1820 1913
IPR026854 VPS13-like_N 14 110
No external refs found!