LOC_Os06g15360.1


Description : shuttle protein (RAD23)


Gene families : OG_01_0001284 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001284_tree ,
OG_02_0001166 (LandPlants) Phylogenetic Tree(s): OG_02_0001166_tree ,
OG_03_0001263 (SeedPlants) Phylogenetic Tree(s): OG_03_0001263_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g15360.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00156p00078120 evm_27.TU.AmTr_v1... Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cre08.g366400 No alias Ubiquitin receptor RAD23b OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g063130.4.1 No alias shuttle protein (RAD23) 0.02 Archaeplastida
Zm00001e030951_P001 No alias shuttle protein (RAD23) 0.02 Archaeplastida
Zm00001e036768_P002 No alias shuttle protein (RAD23) 0.03 Archaeplastida
AT5G38470 RAD23D Rad23 UV excision repair protein family 0.01 LandPlants
MA_3964g0010 No alias no hits & (original description: none) 0.02 LandPlants
Pp3c10_8490V3.1 No alias Rad23 UV excision repair protein family 0.01 LandPlants
Solyc02g063130.4.1 No alias shuttle protein (RAD23) 0.02 LandPlants
AT5G38470 RAD23D Rad23 UV excision repair protein family 0.01 SeedPlants
Solyc02g063130.4.1 No alias shuttle protein (RAD23) 0.02 SeedPlants
Zm00001e030951_P001 No alias shuttle protein (RAD23) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006289 nucleotide-excision repair IEA Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015360 XPC-bd 284 339
IPR015940 UBA 165 203
IPR015940 UBA 367 402
IPR000626 Ubiquitin-like_dom 3 76
No external refs found!