LOC_Os06g15330.1


Description : transcription factor (BBX-CO)


Gene families : OG_01_0000884 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000884_tree ,
OG_02_0000594 (LandPlants) Phylogenetic Tree(s): OG_02_0000594_tree ,
OG_03_0000583 (SeedPlants) Phylogenetic Tree(s): OG_03_0000583_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g15330.1
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
Gb_02486 No alias transcription factor (BBX-CO) 0.05 Archaeplastida
MA_470965g0010 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Pp3c10_22950V3.1 No alias CCT motif family protein 0.02 Archaeplastida
Pp3c8_1870V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 Archaeplastida
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.04 Archaeplastida
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 LandPlants
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
Pp3c8_1870V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 LandPlants
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.02 LandPlants
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.03 LandPlants
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 SeedPlants
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000315 Znf_B-box 18 60
IPR010402 CCT_domain 391 433
No external refs found!