Zm00001d008293 (GRMZM2G028156)


Aliases : GRMZM2G028156

Description : 27.1 RNA.processing SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein


Gene families : OG_01_0003922 (Gene family) Phylogenetic Tree(s): OG0003922_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d008293
Cluster HCCA cluster: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT1G14650 No alias SWAP (Suppressor-of-White-APricot)/surp... 0.04 Gene family
Cpa|evm.model.tig00021501.12 No alias 27.1 RNA.processing SWAP... 0.03 Gene family
Cre06.g307450 No alias 27.1 RNA.processing SWAP... 0.04 Gene family
GSVIVT01012058001 No alias 27.1 RNA.processing SWAP... 0.02 Gene family
LOC_Os02g14780 Os02g0245000 27.1 RNA.processing SWAP... 0.03 Gene family
MA_10432431g0010 No alias 27.1 RNA.processing SWAP... 0.03 Gene family
Smo146605 PACid_15403332 27.1 RNA.processing SWAP... 0.02 Gene family
Solyc02g081960.3.1 Solyc02g081960.3 27.1 RNA.processing SWAP... 0.02 Gene family
Solyc04g005690.3.1 Solyc04g005690.3 27.1 RNA.processing SWAP... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
BP GO:0006396 RNA processing IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 745 801
IPR022030 SF3A1 271 486
IPR000061 Surp 198 249
IPR000061 Surp 68 116
No external refs found!