AMTR_s00073p00033500 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00073.4

Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor

Gene families : OG_01_0000090 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000090_tree ,
OG_02_0000053 (LandPlants) Phylogenetic Tree(s): OG_02_0000053_tree ,
OG_03_0000104 (SeedPlants) Phylogenetic Tree(s): OG_03_0000104_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00073p00033500
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00270580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
AMTR_s00095p00016160	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
AT1G67970	HSFA8, AT-HSFA8	heat shock transcription factor A8	0.03	Archaeplastida
AT3G02990	HSFA1E, ATHSFA1E	heat shock transcription factor A1E	0.03	Archaeplastida
AT3G22830	AT-HSFA6B, HSFA6B	heat shock transcription factor A6B	0.06	Archaeplastida
AT5G62020	AT-HSFB2A, HSFB2A	heat shock transcription factor B2A	0.02	Archaeplastida
GSVIVT01002066001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01009477001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
GSVIVT01037333001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
LOC_Os03g25120.1	No alias	transcription factor (HSF)	0.01	Archaeplastida
LOC_Os05g45410.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os07g44690.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os08g36700.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
LOC_Os09g28200.1	No alias	transcription factor (HSF)	0.09	Archaeplastida
MA_8845456g0010	No alias	transcription factor (HSF)	0.03	Archaeplastida
MA_8992661g0010	No alias	transcription factor (HSF)	0.03	Archaeplastida
MA_91466g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Mp4g12230.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
Pp3c18_9360V3.1	No alias	heat shock transcription factor B4	0.03	Archaeplastida
Pp3c7_4270V3.1	No alias	heat shock transcription factor B4	0.03	Archaeplastida
Smo37324	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
Solyc02g072060.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc04g016000.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc04g078770.4.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc06g053960.3.1	No alias	transcription factor (HSF)	0.05	Archaeplastida
Solyc11g064990.2.1	No alias	transcription factor (HSF)	0.05	Archaeplastida
Zm00001e009909_P001	No alias	transcription factor (HSF)	0.06	Archaeplastida
Zm00001e009944_P001	No alias	transcription factor (HSF)	0.05	Archaeplastida
Zm00001e034336_P001	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e035680_P002	No alias	transcription factor (HSF)	0.06	Archaeplastida
AMTR_s00002p00270580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	LandPlants
AMTR_s00095p00016160	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	LandPlants
AT1G46264	HSFB4, SCZ, AT-HSFB4	heat shock transcription factor B4	0.02	LandPlants
AT1G67970	HSFA8, AT-HSFA8	heat shock transcription factor A8	0.03	LandPlants
AT3G22830	AT-HSFA6B, HSFA6B	heat shock transcription factor A6B	0.04	LandPlants
AT5G03720	HSFA3, AT-HSFA3	heat shock transcription factor A3	0.02	LandPlants
GSVIVT01037333001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	LandPlants
Gb_05885	No alias	transcription factor (HSF)	0.01	LandPlants
LOC_Os07g44690.1	No alias	transcription factor (HSF)	0.02	LandPlants
LOC_Os08g36700.1	No alias	transcription factor (HSF)	0.02	LandPlants
LOC_Os09g28200.1	No alias	transcription factor (HSF)	0.08	LandPlants
MA_8845456g0010	No alias	transcription factor (HSF)	0.03	LandPlants
MA_91466g0010	No alias	no hits & (original description: none)	0.03	LandPlants
Mp4g12230.1	No alias	transcription factor (HSF)	0.02	LandPlants
Pp3c11_20430V3.1	No alias	heat shock transcription factor A1E	0.01	LandPlants
Pp3c18_9360V3.1	No alias	heat shock transcription factor B4	0.02	LandPlants
Smo37324	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	LandPlants
Solyc04g078770.4.1	No alias	transcription factor (HSF)	0.02	LandPlants
Solyc06g053960.3.1	No alias	transcription factor (HSF)	0.04	LandPlants
Solyc11g064990.2.1	No alias	transcription factor (HSF)	0.04	LandPlants
Zm00001e009909_P001	No alias	transcription factor (HSF)	0.05	LandPlants
Zm00001e034336_P001	No alias	transcription factor (HSF)	0.02	LandPlants
Zm00001e035680_P002	No alias	transcription factor (HSF)	0.05	LandPlants
AT1G46264	HSFB4, SCZ, AT-HSFB4	heat shock transcription factor B4	0.02	SeedPlants
AT3G02990	HSFA1E, ATHSFA1E	heat shock transcription factor A1E	0.01	SeedPlants
GSVIVT01037333001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	SeedPlants
LOC_Os07g44690.1	No alias	transcription factor (HSF)	0.02	SeedPlants
LOC_Os08g36700.1	No alias	transcription factor (HSF)	0.02	SeedPlants
LOC_Os09g28200.1	No alias	transcription factor (HSF)	0.07	SeedPlants
MA_8845456g0010	No alias	transcription factor (HSF)	0.02	SeedPlants
MA_91466g0010	No alias	no hits & (original description: none)	0.02	SeedPlants
Solyc04g016000.3.1	No alias	transcription factor (HSF)	0.01	SeedPlants
Solyc04g078770.4.1	No alias	transcription factor (HSF)	0.02	SeedPlants
Solyc06g053960.3.1	No alias	transcription factor (HSF)	0.03	SeedPlants
Solyc11g064990.2.1	No alias	transcription factor (HSF)	0.01	SeedPlants
Zm00001e009909_P001	No alias	transcription factor (HSF)	0.04	SeedPlants
Zm00001e014408_P001	No alias	transcription factor (HSF)	0.01	SeedPlants
Zm00001e034336_P001	No alias	transcription factor (HSF)	0.02	SeedPlants
Zm00001e035680_P002	No alias	transcription factor (HSF)	0.05	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	25	116

External Links

No external refs found!

AMTR_s00073p00033500 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation