LOC_Os06g13670.1


Description : DEL cell cycle interphase transcription factor. transcription factor (E2F/DP)


Gene families : OG_01_0003319 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003319_tree ,
OG_02_0003235 (LandPlants) Phylogenetic Tree(s): OG_02_0003235_tree ,
OG_03_0003409 (SeedPlants) Phylogenetic Tree(s): OG_03_0003409_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g13670.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT3G01330 E2FF, DEL3, E2L2 DP-E2F-like protein 3 0.05 Archaeplastida
AT3G48160 DEL1, E2FE, E2L3 DP-E2F-like 1 0.03 Archaeplastida
Gb_38482 No alias DEL cell cycle interphase transcription factor.... 0.03 Archaeplastida
MA_2814g0010 No alias DEL cell cycle interphase transcription factor.... 0.04 Archaeplastida
Mp3g20990.1 No alias DEL cell cycle interphase transcription factor.... 0.07 Archaeplastida
Pp3c19_18240V3.1 No alias DP-E2F-like 1 0.02 Archaeplastida
Solyc02g087310.3.1 No alias DEL cell cycle interphase transcription factor.... 0.07 Archaeplastida
Solyc03g113760.3.1 No alias DEL cell cycle interphase transcription factor.... 0.05 Archaeplastida
Zm00001e023920_P001 No alias DEL cell cycle interphase transcription factor.... 0.06 Archaeplastida
Zm00001e030907_P001 No alias DEL cell cycle interphase transcription factor.... 0.04 Archaeplastida
AT3G01330 E2FF, DEL3, E2L2 DP-E2F-like protein 3 0.05 LandPlants
AT3G48160 DEL1, E2FE, E2L3 DP-E2F-like 1 0.03 LandPlants
Gb_38482 No alias DEL cell cycle interphase transcription factor.... 0.03 LandPlants
MA_2814g0010 No alias DEL cell cycle interphase transcription factor.... 0.04 LandPlants
Mp3g20990.1 No alias DEL cell cycle interphase transcription factor.... 0.06 LandPlants
Pp3c19_18240V3.1 No alias DP-E2F-like 1 0.02 LandPlants
Smo421405 No alias RNA biosynthesis.transcriptional activation.E2F/DP... 0.02 LandPlants
Solyc02g087310.3.1 No alias DEL cell cycle interphase transcription factor.... 0.07 LandPlants
Solyc03g113760.3.1 No alias DEL cell cycle interphase transcription factor.... 0.05 LandPlants
Zm00001e023920_P001 No alias DEL cell cycle interphase transcription factor.... 0.06 LandPlants
Zm00001e030907_P001 No alias DEL cell cycle interphase transcription factor.... 0.02 LandPlants
AT3G01330 E2FF, DEL3, E2L2 DP-E2F-like protein 3 0.05 SeedPlants
AT3G48160 DEL1, E2FE, E2L3 DP-E2F-like 1 0.03 SeedPlants
Gb_38482 No alias DEL cell cycle interphase transcription factor.... 0.03 SeedPlants
MA_2814g0010 No alias DEL cell cycle interphase transcription factor.... 0.04 SeedPlants
Solyc02g087310.3.1 No alias DEL cell cycle interphase transcription factor.... 0.07 SeedPlants
Solyc03g113760.3.1 No alias DEL cell cycle interphase transcription factor.... 0.05 SeedPlants
Zm00001e023920_P001 No alias DEL cell cycle interphase transcription factor.... 0.06 SeedPlants
Zm00001e030907_P001 No alias DEL cell cycle interphase transcription factor.... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005667 transcription regulator complex IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003316 E2F_WHTH_DNA-bd_dom 204 283
IPR003316 E2F_WHTH_DNA-bd_dom 58 122
No external refs found!