AMTR_s00072p00182810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00072.131

Description : B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0001745 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001745_tree ,
OG_02_0000616 (LandPlants) Phylogenetic Tree(s): OG_02_0000616_tree ,
OG_03_0000481 (SeedPlants) Phylogenetic Tree(s): OG_03_0000481_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00072p00182810
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
MA_104707g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7869355g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c12_17560V3.1 No alias Transcriptional factor B3 family protein 0.02 Archaeplastida
Pp3c17_1930V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 Archaeplastida
MA_10431317g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_104707g0010 No alias no hits & (original description: none) 0.03 LandPlants
Pp3c12_17560V3.1 No alias Transcriptional factor B3 family protein 0.02 LandPlants
Pp3c14_21500V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 LandPlants
Pp3c17_16170V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 LandPlants
Pp3c17_1930V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 LandPlants
Pp3c22_9950V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 LandPlants
Solyc03g007140.3.1 No alias B3 domain-containing protein Os01g0905400 OS=Oryza... 0.02 LandPlants
MA_10431317g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc03g007140.3.1 No alias B3 domain-containing protein Os01g0905400 OS=Oryza... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 30 119
IPR003340 B3_DNA-bd 392 488
No external refs found!