Zm00001d007838 (GRMZM2G170896)


Aliases : GRMZM2G170896

Description : No description available


Gene families : OG_01_0009289 (Gene family) Phylogenetic Tree(s): OG0009289_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d007838
Cluster HCCA cluster: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.1 Gene family
GSVIVT01033735001 No alias No description available 0.05 Gene family
LOC_Os07g07620 Os07g0172600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc01g098150.3.1 Solyc01g098150.3 No description available 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 744 864
IPR002885 Pentatricopeptide_repeat 189 215
IPR002885 Pentatricopeptide_repeat 78 100
IPR002885 Pentatricopeptide_repeat 539 564
IPR002885 Pentatricopeptide_repeat 465 491
IPR002885 Pentatricopeptide_repeat 218 246
IPR002885 Pentatricopeptide_repeat 565 612
IPR002885 Pentatricopeptide_repeat 317 362
No external refs found!