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  5. LOC_Os06g12060.1

LOC_Os06g12060.1


Description : transcription factor (mTERF)


Gene families : OG_01_0000097 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000097_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0000021 (SeedPlants) Phylogenetic Tree(s): OG_03_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12060.1
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00224530 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 Archaeplastida
AMTR_s00010p00239860 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 Archaeplastida
AMTR_s00010p00255890 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 Archaeplastida
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.03 Archaeplastida
Cpa|evm.model.tig00020965.50 No alias RNA biosynthesis.organelle... 0.02 Archaeplastida
MA_31885g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_714651g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_857931g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
Zm00001e015906_P001 No alias transcription factor (mTERF) 0.02 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida
AMTR_s00010p00224530 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 LandPlants
AMTR_s00010p00239860 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 LandPlants
AMTR_s00010p00255890 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 LandPlants
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.03 LandPlants
Gb_12979 No alias transcription factor (mTERF) 0.02 LandPlants
Gb_26213 No alias transcription factor (mTERF) 0.02 LandPlants
MA_714651g0010 No alias transcription factor (mTERF) 0.03 LandPlants
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.02 LandPlants
Zm00001e015906_P001 No alias transcription factor (mTERF) 0.02 LandPlants
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.03 LandPlants
AMTR_s00010p00224530 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 SeedPlants
AMTR_s00010p00239860 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 SeedPlants
AMTR_s00010p00255890 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 SeedPlants
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.02 SeedPlants
Gb_26213 No alias transcription factor (mTERF) 0.02 SeedPlants
Zm00001e015906_P001 No alias transcription factor (mTERF) 0.02 SeedPlants
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003690 MTERF 249 343
IPR003690 MTERF 84 303
IPR003690 MTERF 564 824
No external refs found!