LOC_Os06g11300.1


Description : Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana (sp|q9ls72|pp261_arath : 246.0)


Gene families : OG_01_0017842 (Archaeplastida) Phylogenetic Tree(s): OG_01_0017842_tree ,
OG_02_0017670 (LandPlants) Phylogenetic Tree(s): OG_02_0017670_tree ,
OG_03_0017182 (SeedPlants) Phylogenetic Tree(s): OG_03_0017182_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g11300.1
Cluster HCCA: Cluster_378

Target Alias Description ECC score Gene Family Method Actions
Zm00001e036162_P001 No alias Pentatricopeptide repeat-containing protein At3g29230... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 137 164
IPR002885 Pentatricopeptide_repeat 363 388
IPR002885 Pentatricopeptide_repeat 286 313
IPR002885 Pentatricopeptide_repeat 256 278
IPR002885 Pentatricopeptide_repeat 106 128
IPR002885 Pentatricopeptide_repeat 46 71
IPR002885 Pentatricopeptide_repeat 177 204
IPR002885 Pentatricopeptide_repeat 326 352
IPR002885 Pentatricopeptide_repeat 74 101
No external refs found!