Zm00001d007609 (GRMZM2G041549)


Aliases : GRMZM2G041549

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d007609
Cluster HCCA cluster: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT1G35330 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G44578 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G03550 No alias RING/U-box superfamily protein 0.04 Gene family
AT3G05200 ATL6 RING/U-box superfamily protein 0.04 Gene family
AT3G18773 No alias RING/U-box superfamily protein 0.03 Gene family
AT4G35480 RHA3B RING-H2 finger A3B 0.03 Gene family
AT5G05280 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G06490 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G17600 No alias RING/U-box superfamily protein 0.05 Gene family
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 Gene family
LOC_Os02g46340 Os02g0688800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os02g49710 No alias No description available 0.05 Gene family
LOC_Os02g52210 Os02g0759400 No description available 0.03 Gene family
LOC_Os03g28080 Os03g0398600 No description available 0.03 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os05g45060 Os05g0526600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g12560 Os06g0231600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g34610 Os06g0537100 No description available 0.03 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os09g29310 Os09g0468300 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os10g41660 Os10g0566400 No description available 0.03 Gene family
LOC_Os11g02424 Os11g0116200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os12g24490 Os12g0432600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.02 Gene family
MA_10429624g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436028g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436650g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_12363g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_129306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_904294g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo39820 PACid_15420975 No description available 0.02 Gene family
Smo412609 PACid_15413015 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc00g217960.1.1 Solyc00g217960.1 No description available 0.02 Gene family
Solyc01g066430.3.1 Solyc01g066430.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc01g088440.2.1 Solyc01g088440.2 No description available 0.03 Gene family
Solyc01g098725.1.1 Solyc01g098725.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.03 Gene family
Solyc02g083400.3.1 Solyc02g083400.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc02g086950.1.1 Solyc02g086950.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc03g114190.1.1 Solyc03g114190.1 No description available 0.03 Gene family
Solyc03g123680.1.1 Solyc03g123680.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc04g082690.1.1 Solyc04g082690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Solyc06g053640.1.1 Solyc06g053640.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g011880.1.1 Solyc10g011880.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc12g009065.1.1 Solyc12g009065.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc12g055710.1.1 Solyc12g055710.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d008914 GRMZM2G014571 No description available 0.03 Gene family
Zm00001d016140 GRMZM2G358711 No description available 0.02 Gene family
Zm00001d017645 GRMZM2G057789 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.05 Gene family
Zm00001d023341 GRMZM2G467576 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d025837 GRMZM2G016487 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d037192 GRMZM2G329195 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d040638 No alias No description available 0.03 Gene family
Zm00001d045051 GRMZM2G478553 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d050798 GRMZM2G044773 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 206 249
No external refs found!