LOC_Os06g09850.1


Description : SEC22-type R-type SNARE longin protein


Gene families : OG_01_0003506 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003506_tree ,
OG_02_0003474 (LandPlants) Phylogenetic Tree(s): OG_02_0003474_tree ,
OG_03_0003456 (SeedPlants) Phylogenetic Tree(s): OG_03_0003456_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g09850.1
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271790 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Cpa|evm.model.tig00000042.86 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Cre12.g554700 No alias Vesicle trafficking.SNARE target membrane recognition... 0.05 Archaeplastida
Gb_13116 No alias SEC22-type R-type SNARE longin protein 0.05 Archaeplastida
Gb_30969 No alias SEC22-type R-type SNARE longin protein 0.02 Archaeplastida
Smo228494 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
Solyc03g122090.3.1 No alias SEC22-type R-type SNARE longin protein 0.02 Archaeplastida
Zm00001e005953_P001 No alias SEC22-type R-type SNARE longin protein 0.06 Archaeplastida
Zm00001e016377_P002 No alias SEC22-type R-type SNARE longin protein 0.04 Archaeplastida
AMTR_s00002p00271790 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.03 LandPlants
Gb_13116 No alias SEC22-type R-type SNARE longin protein 0.05 LandPlants
Gb_30969 No alias SEC22-type R-type SNARE longin protein 0.02 LandPlants
Smo228494 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 LandPlants
Solyc03g122090.3.1 No alias SEC22-type R-type SNARE longin protein 0.02 LandPlants
Zm00001e005953_P001 No alias SEC22-type R-type SNARE longin protein 0.06 LandPlants
Zm00001e016377_P002 No alias SEC22-type R-type SNARE longin protein 0.04 LandPlants
Gb_13116 No alias SEC22-type R-type SNARE longin protein 0.05 SeedPlants
Gb_30969 No alias SEC22-type R-type SNARE longin protein 0.02 SeedPlants
Solyc03g122090.3.1 No alias SEC22-type R-type SNARE longin protein 0.02 SeedPlants
Zm00001e005953_P001 No alias SEC22-type R-type SNARE longin protein 0.06 SeedPlants
Zm00001e016377_P002 No alias SEC22-type R-type SNARE longin protein 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010908 Longin_dom 36 118
IPR001388 Synaptobrevin 133 213
No external refs found!