LOC_Os06g09340.1


Description : pectin methylesterase


Gene families : OG_01_0000046 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000046_tree ,
OG_02_0000020 (LandPlants) Phylogenetic Tree(s): OG_02_0000020_tree ,
OG_03_0000014 (SeedPlants) Phylogenetic Tree(s): OG_03_0000014_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g09340.1
Cluster HCCA: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
AMTR_s00033p00227850 evm_27.TU.AmTr_v1... Probable pectinesterase/pectinesterase inhibitor 21... 0.02 Archaeplastida
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
AMTR_s00129p00031200 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00129p00044320 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00129p00070300 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT3G10720 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
AT4G02300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT4G02330 ATPMEPCRB Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.04 Archaeplastida
AT5G09760 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.03 Archaeplastida
GSVIVT01016667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01031164001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_01422 No alias pectin methylesterase 0.04 Archaeplastida
Gb_01424 No alias pectin methylesterase 0.03 Archaeplastida
Gb_05254 No alias pectin methylesterase 0.04 Archaeplastida
Gb_06354 No alias pectin methylesterase 0.04 Archaeplastida
Gb_10522 No alias pectin methylesterase 0.04 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.05 Archaeplastida
Gb_21388 No alias pectin methylesterase 0.03 Archaeplastida
Gb_25439 No alias pectin methylesterase 0.03 Archaeplastida
Gb_28387 No alias pectin methylesterase 0.03 Archaeplastida
Gb_35881 No alias pectin methylesterase 0.03 Archaeplastida
Gb_36012 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os02g18650.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os03g18860.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os04g38560.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_10372207g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_10434127g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_10435891g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_10436266g0010 No alias Pectinesterase 3 OS=Citrus sinensis... 0.02 Archaeplastida
MA_177306g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_177599g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_18093g0010 No alias Pectinesterase 2.1 OS=Solanum lycopersicum... 0.03 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5681731g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_648837g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_86577g0010 No alias pectin methylesterase 0.06 Archaeplastida
MA_931259g0010 No alias pectin methylesterase 0.02 Archaeplastida
Mp6g15150.1 No alias pectin methylesterase 0.03 Archaeplastida
Mp8g00060.1 No alias pectin methylesterase 0.03 Archaeplastida
Mp8g09330.1 No alias pectin methylesterase 0.03 Archaeplastida
Pp3c10_25030V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c15_12280V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.05 Archaeplastida
Pp3c18_170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c18_22120V3.1 No alias pectin methylesterase PCR fragment F 0.03 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
Pp3c26_2170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
Smo83744 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g078100.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc03g083360.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083840.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g123620.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc06g034360.2.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g017600.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e009863_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e017515_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e019069_P001 No alias pectin methylesterase 0.07 Archaeplastida
Zm00001e022184_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e025576_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e034231_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e035838_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e036264_P001 No alias pectin methylesterase 0.02 Archaeplastida
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
AMTR_s00129p00044320 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
AMTR_s00129p00070300 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
AMTR_s00129p00073090 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.01 LandPlants
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT1G53840 PME1, ATPME1 pectin methylesterase 1 0.02 LandPlants
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT3G10720 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 LandPlants
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT4G02330 ATPMEPCRB Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
GSVIVT01016667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 LandPlants
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
Gb_06354 No alias pectin methylesterase 0.04 LandPlants
Gb_10522 No alias pectin methylesterase 0.02 LandPlants
Gb_10523 No alias pectin methylesterase 0.02 LandPlants
LOC_Os02g18650.1 No alias pectin methylesterase 0.03 LandPlants
LOC_Os08g34900.1 No alias pectin methylesterase 0.03 LandPlants
MA_10372207g0010 No alias pectin methylesterase 0.02 LandPlants
MA_10434127g0010 No alias pectin methylesterase 0.02 LandPlants
MA_10435891g0010 No alias pectin methylesterase 0.02 LandPlants
MA_177599g0010 No alias pectin methylesterase 0.02 LandPlants
MA_648837g0010 No alias pectin methylesterase 0.02 LandPlants
MA_86577g0010 No alias pectin methylesterase 0.03 LandPlants
MA_8928694g0010 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.03 LandPlants
Mp8g00060.1 No alias pectin methylesterase 0.02 LandPlants
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 LandPlants
Solyc02g014300.2.1 No alias pectin methylesterase 0.03 LandPlants
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.05 LandPlants
Solyc03g083840.3.1 No alias pectin methylesterase 0.03 LandPlants
Solyc03g083870.4.1 No alias pectin methylesterase 0.03 LandPlants
Solyc03g123620.4.1 No alias pectin methylesterase 0.02 LandPlants
Solyc07g017600.3.1 No alias pectin methylesterase 0.03 LandPlants
Zm00001e017514_P001 No alias pectin methylesterase 0.04 LandPlants
Zm00001e017515_P001 No alias pectin methylesterase 0.03 LandPlants
Zm00001e022184_P001 No alias pectin methylesterase 0.03 LandPlants
Zm00001e025576_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e034231_P001 No alias pectin methylesterase 0.02 LandPlants
Zm00001e035838_P001 No alias pectin methylesterase 0.03 LandPlants
Zm00001e036264_P001 No alias pectin methylesterase 0.02 LandPlants
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.01 SeedPlants
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.01 SeedPlants
AT1G11580 ATPMEPCRA, PMEPCRA methylesterase PCR A 0.01 SeedPlants
AT3G10720 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 SeedPlants
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 SeedPlants
GSVIVT01016667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 SeedPlants
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
Gb_06356 No alias pectin methylesterase 0.01 SeedPlants
Gb_10522 No alias pectin methylesterase 0.02 SeedPlants
MA_10434127g0010 No alias pectin methylesterase 0.02 SeedPlants
MA_177599g0010 No alias pectin methylesterase 0.01 SeedPlants
MA_648837g0010 No alias pectin methylesterase 0.01 SeedPlants
MA_84680g0010 No alias pectin methylesterase 0.01 SeedPlants
MA_8928694g0010 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.01 SeedPlants
Solyc02g014300.2.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc03g083870.4.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc07g017600.3.1 No alias pectin methylesterase 0.02 SeedPlants
Zm00001e004056_P002 No alias no hits & (original description: none) 0.01 SeedPlants
Zm00001e009863_P001 No alias pectin methylesterase 0.02 SeedPlants
Zm00001e017515_P001 No alias pectin methylesterase 0.03 SeedPlants
Zm00001e022184_P001 No alias pectin methylesterase 0.03 SeedPlants
Zm00001e025576_P001 No alias no hits & (original description: none) 0.01 SeedPlants
Zm00001e034231_P001 No alias pectin methylesterase 0.02 SeedPlants
Zm00001e041006_P001 No alias pectin methylesterase 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 274 571
IPR006501 Pectinesterase_inhib_dom 57 216
No external refs found!