1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g09290.2

LOC_Os06g09290.2


Description : regulatory component RPT1 of 26S proteasome


Gene families : OG_01_0003582 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003582_tree ,
OG_02_0003574 (LandPlants) Phylogenetic Tree(s): OG_02_0003574_tree ,
OG_03_0070942 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g09290.2
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00084690 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
AT1G53750 RPT1A regulatory particle triple-A 1A 0.06 Archaeplastida
Cpa|evm.model.tig00021464.16 No alias Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
Cre14.g625400 No alias Protein degradation.26S proteasome.regulatory... 0.07 Archaeplastida
MA_10435556g0010 No alias regulatory component RPT1 of 26S proteasome 0.02 Archaeplastida
Mp2g04840.1 No alias regulatory component RPT1 of 26S proteasome 0.06 Archaeplastida
Pp3c20_1430V3.1 No alias regulatory particle triple-A 1A 0.02 Archaeplastida
Pp3c23_18300V3.1 No alias regulatory particle triple-A 1A 0.04 Archaeplastida
Smo146742 No alias Protein degradation.26S proteasome.regulatory... 0.06 Archaeplastida
Solyc03g123730.4.1 No alias regulatory component RPT1 of 26S proteasome 0.03 Archaeplastida
Solyc06g063140.4.1 No alias regulatory component RPT1 of 26S proteasome 0.03 Archaeplastida
Zm00001e016066_P001 No alias regulatory component RPT1 of 26S proteasome 0.05 Archaeplastida
Zm00001e023743_P001 No alias regulatory component RPT1 of 26S proteasome 0.04 Archaeplastida
AMTR_s00131p00084690 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.02 LandPlants
AT1G53750 RPT1A regulatory particle triple-A 1A 0.06 LandPlants
Mp2g04840.1 No alias regulatory component RPT1 of 26S proteasome 0.06 LandPlants
Pp3c20_1430V3.1 No alias regulatory particle triple-A 1A 0.02 LandPlants
Pp3c23_18300V3.1 No alias regulatory particle triple-A 1A 0.04 LandPlants
Smo146742 No alias Protein degradation.26S proteasome.regulatory... 0.06 LandPlants
Solyc03g123730.4.1 No alias regulatory component RPT1 of 26S proteasome 0.03 LandPlants
Solyc06g063140.4.1 No alias regulatory component RPT1 of 26S proteasome 0.03 LandPlants
Zm00001e016066_P001 No alias regulatory component RPT1 of 26S proteasome 0.05 LandPlants
Zm00001e023743_P001 No alias regulatory component RPT1 of 26S proteasome 0.04 LandPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 205 337
No external refs found!