LOC_Os06g08770.1


Description : helicase component RVB of chromatin remodeling complex


Gene families : OG_01_0004276 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004276_tree ,
OG_02_0006703 (LandPlants) Phylogenetic Tree(s): OG_02_0006703_tree ,
OG_03_0007813 (SeedPlants) Phylogenetic Tree(s): OG_03_0007813_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g08770.1
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00078900 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
AT5G67630 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Gb_04895 No alias helicase component RVB of chromatin remodeling complex 0.04 Archaeplastida
MA_10436492g0010 No alias RuvB-like protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c14_1470V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c16_8750V3.1 No alias elongator protein 2 0.03 Archaeplastida
Zm00001e010626_P001 No alias helicase component RVB of chromatin remodeling complex 0.07 Archaeplastida
Zm00001e035364_P001 No alias helicase component RVB of chromatin remodeling complex 0.06 Archaeplastida
AMTR_s00049p00078900 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.02 LandPlants
AT5G67630 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 LandPlants
Gb_04895 No alias helicase component RVB of chromatin remodeling complex 0.03 LandPlants
MA_10436492g0010 No alias RuvB-like protein 1 OS=Arabidopsis thaliana... 0.02 LandPlants
Pp3c14_1470V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 LandPlants
Solyc03g032070.3.1 No alias helicase component RVB of chromatin remodeling complex 0.02 LandPlants
Zm00001e010626_P001 No alias helicase component RVB of chromatin remodeling complex 0.07 LandPlants
Zm00001e035364_P001 No alias helicase component RVB of chromatin remodeling complex 0.06 LandPlants
AMTR_s00049p00078900 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.02 SeedPlants
AT5G67630 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 SeedPlants
Gb_04895 No alias helicase component RVB of chromatin remodeling complex 0.03 SeedPlants
MA_10436492g0010 No alias RuvB-like protein 1 OS=Arabidopsis thaliana... 0.01 SeedPlants
Solyc03g032070.3.1 No alias helicase component RVB of chromatin remodeling complex 0.02 SeedPlants
Zm00001e010626_P001 No alias helicase component RVB of chromatin remodeling complex 0.07 SeedPlants
Zm00001e035364_P001 No alias helicase component RVB of chromatin remodeling complex 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010339 TIP49_P-loop 18 374
IPR041048 RuvB-like_C 380 445
No external refs found!