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  5. AMTR_s00004p00079950

AMTR_s00004p00079950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.65

Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT8 theta subunit


Gene families : OG_01_0006424 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006424_tree ,
OG_02_0007960 (LandPlants) Phylogenetic Tree(s): OG_02_0007960_tree ,
OG_03_0009313 (SeedPlants) Phylogenetic Tree(s): OG_03_0009313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00079950
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT3G03960 No alias TCP-1/cpn60 chaperonin family protein 0.11 Archaeplastida
Cpa|evm.model.tig00000157.20 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 Archaeplastida
Cre03.g168450 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 Archaeplastida
GSVIVT01033394001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 Archaeplastida
LOC_Os03g59020.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.1 Archaeplastida
MA_100776g0010 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.08 Archaeplastida
Mp6g01500.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.04 Archaeplastida
Pp3c15_13410V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.02 Archaeplastida
Smo143104 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
Solyc01g088080.3.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.11 Archaeplastida
Zm00001e011242_P002 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.06 Archaeplastida
Zm00001e024443_P002 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.07 Archaeplastida
AT3G03960 No alias TCP-1/cpn60 chaperonin family protein 0.1 LandPlants
GSVIVT01033394001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 LandPlants
LOC_Os03g59020.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.09 LandPlants
MA_100776g0010 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.08 LandPlants
Mp6g01500.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.04 LandPlants
Pp3c15_13410V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.02 LandPlants
Smo143104 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 LandPlants
Solyc01g088080.3.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.11 LandPlants
Zm00001e011242_P002 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.06 LandPlants
Zm00001e024443_P002 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.06 LandPlants
AT3G03960 No alias TCP-1/cpn60 chaperonin family protein 0.1 SeedPlants
GSVIVT01033394001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 SeedPlants
LOC_Os03g59020.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.09 SeedPlants
MA_100776g0010 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.07 SeedPlants
Solyc01g088080.3.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.11 SeedPlants
Zm00001e011242_P002 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.06 SeedPlants
Zm00001e024443_P002 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0044267 cellular protein metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 38 529
No external refs found!