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  5. Zm00001d007295

Zm00001d007295 (GRMZM2G048680)


Aliases : GRMZM2G048680

Description : 27.3.99 RNA.regulation of transcription.unclassified Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls. seuss (SEU)


Gene families : OG_01_0001209 (Gene family) Phylogenetic Tree(s): OG0001209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d007295
Cluster HCCA cluster: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010013001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
LOC_Os06g03600 Os06g0126000 35.2 not assigned.unknown SEUSS-like 2 (SLK2) BEST... 0.04 Gene family
LOC_Os11g10060 Os11g0207000 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
LOC_Os11g10070 Os11g0207100 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
MA_12796g0010 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.02 Gene family
MA_28020g0010 No alias 35.2 not assigned.unknown SEUSS-like 2 (SLK2) BEST... 0.03 Gene family
Solyc03g026190.3.1 Solyc03g026190.3 35.2 not assigned.unknown SEUSS-like 2 (SLK2) BEST... 0.04 Gene family
Solyc06g059750.3.1 Solyc06g059750.3 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Solyc06g059760.3.1 Solyc06g059760.3 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d041803 GRMZM2G358050 27.3.99 RNA.regulation of transcription.unclassified... 0.06 Gene family
Zm00001d049125 GRMZM2G017865 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 357 610
No external refs found!