AMTR_s00072p00125230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00072.64

Description : ATP-dependent Clp protease proteolytic subunit OS=Amborella trichopoda


Gene families : OG_01_0005411 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005411_tree ,
OG_02_0003897 (LandPlants) Phylogenetic Tree(s): OG_02_0003897_tree ,
OG_03_0002670 (SeedPlants) Phylogenetic Tree(s): OG_03_0002670_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00072p00125230
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
ATCG00670 CLPP1, PCLPP plastid-encoded CLP P 0.11 Archaeplastida
Gb_41557 No alias ATP-dependent Clp protease proteolytic subunit OS=Cycas... 0.03 Archaeplastida
LOC_Os06g39712.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.07 Archaeplastida
LOC_Os08g15270.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.18 Archaeplastida
LOC_Os10g21300.1 No alias ATP-dependent Clp protease proteolytic subunit OS=Oryza... 0.12 Archaeplastida
Mpzg01030.3 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.05 Archaeplastida
Smo137715 No alias Protein degradation.peptidase families.serine-type... 0.07 Archaeplastida
Solyc00g500070.1.1 No alias ATP-dependent Clp protease proteolytic subunit... 0.03 Archaeplastida
Zm00001e003904_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.04 Archaeplastida
Zm00001e015950_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e042026_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.04 Archaeplastida
Zm00001e042065_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.04 Archaeplastida
Zm00001e042085_P001 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.07 Archaeplastida
ATCG00670 CLPP1, PCLPP plastid-encoded CLP P 0.11 LandPlants
Gb_41557 No alias ATP-dependent Clp protease proteolytic subunit OS=Cycas... 0.03 LandPlants
LOC_Os06g39712.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.06 LandPlants
LOC_Os08g15270.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.18 LandPlants
LOC_Os10g21300.1 No alias ATP-dependent Clp protease proteolytic subunit OS=Oryza... 0.12 LandPlants
Mpzg01030.3 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 LandPlants
Smo137715 No alias Protein degradation.peptidase families.serine-type... 0.07 LandPlants
Solyc00g500070.1.1 No alias ATP-dependent Clp protease proteolytic subunit... 0.03 LandPlants
Zm00001e003904_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.04 LandPlants
Zm00001e015950_P001 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e042026_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.04 LandPlants
Zm00001e042065_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.04 LandPlants
Zm00001e042085_P001 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.07 LandPlants
Zm00001e042466_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.02 LandPlants
ATCG00670 CLPP1, PCLPP plastid-encoded CLP P 0.12 SeedPlants
Gb_41557 No alias ATP-dependent Clp protease proteolytic subunit OS=Cycas... 0.03 SeedPlants
LOC_Os06g39712.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 SeedPlants
LOC_Os08g15270.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.18 SeedPlants
LOC_Os10g21300.1 No alias ATP-dependent Clp protease proteolytic subunit OS=Oryza... 0.12 SeedPlants
Solyc00g500070.1.1 No alias ATP-dependent Clp protease proteolytic subunit... 0.02 SeedPlants
Zm00001e003904_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.04 SeedPlants
Zm00001e015950_P001 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e042026_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.04 SeedPlants
Zm00001e042065_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.04 SeedPlants
Zm00001e042085_P001 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.07 SeedPlants
Zm00001e042466_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023562 ClpP/TepA 1 72
No external refs found!