AMTR_s00072p00117380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00072.59

Description : Cell division control protein 48 homolog D OS=Arabidopsis thaliana


Gene families : OG_01_0000169 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000169_tree ,
OG_02_0001221 (LandPlants) Phylogenetic Tree(s): OG_02_0001221_tree ,
OG_03_0001614 (SeedPlants) Phylogenetic Tree(s): OG_03_0001614_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00072p00117380
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007689001 No alias Cell division cycle protein 48 homolog OS=Glycine max 0.03 Archaeplastida
GSVIVT01025723001 No alias Cell division control protein 48 homolog D... 0.03 Archaeplastida
LOC_Os03g05730.1 No alias platform ATPase (CDC48) 0.02 Archaeplastida
LOC_Os08g31870.1 No alias platform ATPase (CDC48) 0.02 Archaeplastida
LOC_Os08g44240.1 No alias component Pex1 of Pex1-Pex6 subcomplex 0.03 Archaeplastida
LOC_Os11g11340.1 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.04 Archaeplastida
MA_10168585g0010 No alias platform ATPase (CDC48) 0.02 Archaeplastida
MA_26837g0010 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.02 Archaeplastida
Mp2g12350.1 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c26_8300V3.1 No alias ATPase, AAA-type, CDC48 protein 0.03 Archaeplastida
Pp3c3_6980V3.1 No alias ATPase, AAA-type, CDC48 protein 0.04 Archaeplastida
Pp3c4_26860V3.1 No alias ATPase, AAA-type, CDC48 protein 0.04 Archaeplastida
Pp3c8_20390V3.1 No alias peroxisome 1 0.02 Archaeplastida
Pp3c9_3020V3.1 No alias ATPase, AAA-type, CDC48 protein 0.02 Archaeplastida
Smo145748 No alias Cell division cycle protein 48 homolog OS=Glycine max 0.02 Archaeplastida
Smo89456 No alias Cell division control protein 48 homolog C... 0.03 Archaeplastida
Solyc06g074980.3.1 No alias platform ATPase (CDC48) 0.04 Archaeplastida
Zm00001e000416_P002 No alias platform ATPase (CDC48) 0.06 Archaeplastida
Zm00001e004072_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e004696_P001 No alias platform ATPase (CDC48) 0.02 Archaeplastida
Zm00001e012761_P001 No alias platform ATPase (CDC48) 0.03 Archaeplastida
Zm00001e021405_P001 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e022089_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035514_P002 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
GSVIVT01007689001 No alias Cell division cycle protein 48 homolog OS=Glycine max 0.02 LandPlants
GSVIVT01025723001 No alias Cell division control protein 48 homolog D... 0.03 LandPlants
LOC_Os03g05730.1 No alias platform ATPase (CDC48) 0.02 LandPlants
Pp3c3_6980V3.1 No alias ATPase, AAA-type, CDC48 protein 0.04 LandPlants
Pp3c4_26860V3.1 No alias ATPase, AAA-type, CDC48 protein 0.03 LandPlants
Pp3c9_3020V3.1 No alias ATPase, AAA-type, CDC48 protein 0.02 LandPlants
Smo145748 No alias Cell division cycle protein 48 homolog OS=Glycine max 0.02 LandPlants
Solyc06g074980.3.1 No alias platform ATPase (CDC48) 0.04 LandPlants
Zm00001e000416_P002 No alias platform ATPase (CDC48) 0.06 LandPlants
Zm00001e004696_P001 No alias platform ATPase (CDC48) 0.02 LandPlants
Zm00001e012761_P001 No alias platform ATPase (CDC48) 0.03 LandPlants
GSVIVT01025723001 No alias Cell division control protein 48 homolog D... 0.03 SeedPlants
LOC_Os03g05730.1 No alias platform ATPase (CDC48) 0.02 SeedPlants
MA_10168585g0010 No alias platform ATPase (CDC48) 0.01 SeedPlants
Solyc06g074980.3.1 No alias platform ATPase (CDC48) 0.03 SeedPlants
Zm00001e000416_P002 No alias platform ATPase (CDC48) 0.05 SeedPlants
Zm00001e004696_P001 No alias platform ATPase (CDC48) 0.02 SeedPlants
Zm00001e012761_P001 No alias platform ATPase (CDC48) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 245 374
IPR003959 ATPase_AAA_core 518 651
IPR003338 CDC4_N-term_subdom 30 112
IPR004201 Cdc48_dom2 132 195
No external refs found!