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  5. LOC_Os05g51790.1

LOC_Os05g51790.1


Description : component SMC5 of homologous recombination repair Smc5-Smc6 complex


Gene families : OG_01_0003586 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003586_tree ,
OG_02_0007645 (LandPlants) Phylogenetic Tree(s): OG_02_0007645_tree ,
OG_03_0008301 (SeedPlants) Phylogenetic Tree(s): OG_03_0008301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g51790.1
Cluster HCCA: Cluster_376

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00247730 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.homologous... 0.02 Archaeplastida
MA_10432022g0010 No alias Structural maintenance of chromosomes protein 5... 0.03 Archaeplastida
MA_114320g0010 No alias Structural maintenance of chromosomes protein 5... 0.04 Archaeplastida
Mp3g00700.1 No alias component SMC5 of homologous recombination repair... 0.03 Archaeplastida
Pp3c24_4940V3.1 No alias structural maintenance of chromosomes 5 0.05 Archaeplastida
Smo174036 No alias DNA damage response.DNA repair mechanisms.homologous... 0.03 Archaeplastida
Zm00001e013059_P001 No alias component SMC5 of homologous recombination repair... 0.07 Archaeplastida
AMTR_s00025p00247730 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.homologous... 0.02 LandPlants
Gb_33241 No alias component SMC5 of homologous recombination repair... 0.02 LandPlants
Mp3g00700.1 No alias component SMC5 of homologous recombination repair... 0.03 LandPlants
Pp3c24_4940V3.1 No alias structural maintenance of chromosomes 5 0.05 LandPlants
Smo174036 No alias DNA damage response.DNA repair mechanisms.homologous... 0.02 LandPlants
Zm00001e013059_P001 No alias component SMC5 of homologous recombination repair... 0.05 LandPlants
AMTR_s00025p00247730 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.homologous... 0.02 SeedPlants
Gb_33241 No alias component SMC5 of homologous recombination repair... 0.02 SeedPlants
Zm00001e013059_P001 No alias component SMC5 of homologous recombination repair... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003395 RecF/RecN/SMC_N 40 1008
No external refs found!