1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g49970.1

LOC_Os05g49970.1


Description : IF-2 translation initiation factor


Gene families : OG_01_0002135 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002135_tree ,
OG_02_0007098 (LandPlants) Phylogenetic Tree(s): OG_02_0007098_tree ,
OG_03_0007676 (SeedPlants) Phylogenetic Tree(s): OG_03_0007676_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g49970.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00096920 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 Archaeplastida
AT1G17220 FUG1 Translation initiation factor 2, small GTP-binding protein 0.14 Archaeplastida
Cpa|evm.model.tig00000842.11 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Cre07.g341850 No alias Protein biosynthesis.organelle translation... 0.05 Archaeplastida
GSVIVT01020495001 No alias Protein biosynthesis.organelle translation... 0.1 Archaeplastida
Gb_26690 No alias IF-2 translation initiation factor 0.07 Archaeplastida
MA_4340g0010 No alias IF-2 translation initiation factor 0.08 Archaeplastida
MA_93993g0010 No alias Translation initiation factor IF-2, chloroplastic... 0.06 Archaeplastida
Mp3g09840.1 No alias IF-2 translation initiation factor 0.05 Archaeplastida
Pp3c1_24000V3.1 No alias Translation initiation factor 2, small GTP-binding protein 0.1 Archaeplastida
Smo148692 No alias Protein biosynthesis.organelle translation... 0.08 Archaeplastida
Solyc07g056020.3.1 No alias IF-2 translation initiation factor 0.13 Archaeplastida
Zm00001e031527_P002 No alias IF-2 translation initiation factor 0.19 Archaeplastida
AMTR_s00092p00096920 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 LandPlants
AT1G17220 FUG1 Translation initiation factor 2, small GTP-binding protein 0.13 LandPlants
GSVIVT01020495001 No alias Protein biosynthesis.organelle translation... 0.08 LandPlants
Gb_26690 No alias IF-2 translation initiation factor 0.06 LandPlants
MA_4340g0010 No alias IF-2 translation initiation factor 0.07 LandPlants
MA_93993g0010 No alias Translation initiation factor IF-2, chloroplastic... 0.04 LandPlants
Mp3g09840.1 No alias IF-2 translation initiation factor 0.04 LandPlants
Pp3c1_24000V3.1 No alias Translation initiation factor 2, small GTP-binding protein 0.09 LandPlants
Smo148692 No alias Protein biosynthesis.organelle translation... 0.08 LandPlants
Solyc07g056020.3.1 No alias IF-2 translation initiation factor 0.11 LandPlants
Zm00001e031527_P002 No alias IF-2 translation initiation factor 0.19 LandPlants
AMTR_s00092p00096920 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 SeedPlants
AT1G17220 FUG1 Translation initiation factor 2, small GTP-binding protein 0.13 SeedPlants
GSVIVT01020495001 No alias Protein biosynthesis.organelle translation... 0.07 SeedPlants
Gb_26690 No alias IF-2 translation initiation factor 0.06 SeedPlants
MA_4340g0010 No alias IF-2 translation initiation factor 0.06 SeedPlants
MA_93993g0010 No alias Translation initiation factor IF-2, chloroplastic... 0.04 SeedPlants
Solyc07g056020.3.1 No alias IF-2 translation initiation factor 0.11 SeedPlants
Zm00001e031527_P002 No alias IF-2 translation initiation factor 0.18 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 430 590
No external refs found!