Zm00001d006296 (GRMZM2G117870)


Aliases : GRMZM2G117870

Description : 29.1.9 protein.aa activation.valine-tRNA ligase Required for proper proliferation of basal cells. TWIN 2 (TWN2)


Gene families : OG_01_0000880 (Gene family) Phylogenetic Tree(s): OG0000880_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d006296
Cluster HCCA cluster: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT1G14610 VALRS, TWN2 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) 0.07 Gene family
Cpa|evm.model.tig00001130.5 No alias 29.1.9 protein.aa activation.valine-tRNA ligase Required... 0.06 Gene family
Cre07.g350500 No alias 29.1.9 protein.aa activation.valine-tRNA ligase embryo... 0.01 Gene family
Cre12.g537100 No alias 29.1.9 protein.aa activation.valine-tRNA ligase Required... 0.08 Gene family
GSVIVT01010632001 No alias 29.1.9 protein.aa activation.valine-tRNA ligase Required... 0.06 Gene family
LOC_Os03g48850 Os03g0694900 29.1.9 protein.aa activation.valine-tRNA ligase Required... 0.06 Gene family
Smo141956 PACid_15413568 No description available 0.05 Gene family
Solyc09g007540.3.1 Solyc09g007540.3 29.1.9 protein.aa activation.valine-tRNA ligase Required... 0.09 Gene family
Zm00001d024492 GRMZM2G438602 29.1.9 protein.aa activation.valine-tRNA ligase Required... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002300 aa-tRNA-synth_Ia 111 502
No external refs found!