LOC_Os05g48690.1


Description : transcription factor (Trihelix)


Gene families : OG_01_0000562 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000562_tree ,
OG_02_0000321 (LandPlants) Phylogenetic Tree(s): OG_02_0000321_tree ,
OG_03_0000571 (SeedPlants) Phylogenetic Tree(s): OG_03_0000571_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g48690.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00020440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 Archaeplastida
AMTR_s00007p00263040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 Archaeplastida
AT3G24490 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.02 Archaeplastida
GSVIVT01016703001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 Archaeplastida
Gb_02173 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Gb_04257 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g35690.1 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_6829664g0010 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_6944g0010 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Mp4g09730.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Solyc07g055100.4.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Zm00001e010331_P002 No alias transcription factor (Trihelix) 0.06 Archaeplastida
Zm00001e020188_P001 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Zm00001e032412_P001 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Zm00001e034887_P001 No alias transcription factor (Trihelix) 0.04 Archaeplastida
AMTR_s00007p00263040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 LandPlants
GSVIVT01016703001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 LandPlants
LOC_Os02g35690.1 No alias transcription factor (Trihelix) 0.04 LandPlants
MA_49315g0010 No alias transcription factor (Trihelix) 0.02 LandPlants
MA_6829664g0010 No alias transcription factor (Trihelix) 0.03 LandPlants
MA_6944g0010 No alias transcription factor (Trihelix) 0.02 LandPlants
Mp4g09730.1 No alias transcription factor (Trihelix) 0.02 LandPlants
Pp3c7_2960V3.1 No alias sequence-specific DNA binding transcription factors 0.01 LandPlants
Solyc07g055100.4.1 No alias transcription factor (Trihelix) 0.02 LandPlants
Zm00001e010331_P002 No alias transcription factor (Trihelix) 0.06 LandPlants
Zm00001e020188_P001 No alias transcription factor (Trihelix) 0.03 LandPlants
Zm00001e028191_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e034887_P001 No alias transcription factor (Trihelix) 0.04 LandPlants
GSVIVT01016703001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 SeedPlants
Gb_19309 No alias transcription factor (Trihelix) 0.01 SeedPlants
LOC_Os02g35690.1 No alias transcription factor (Trihelix) 0.03 SeedPlants
MA_6829664g0010 No alias transcription factor (Trihelix) 0.03 SeedPlants
Zm00001e020188_P001 No alias transcription factor (Trihelix) 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!