LOC_Os05g47900.1

Description : RING-v-class E3 ligase

Gene families : OG_01_0000436 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000436_tree ,
OG_02_0014151 (LandPlants) Phylogenetic Tree(s): OG_02_0014151_tree ,
OG_03_0014064 (SeedPlants) Phylogenetic Tree(s): OG_03_0014064_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g47900.1
Cluster	HCCA: Cluster_68

Target	Alias	Description	ECC score	Gene Family Method
Solyc02g091230.4.1	No alias	RING-v-class E3 ligase	0.07	Archaeplastida
Zm00001e028087_P001	No alias	RING-v-class E3 ligase	0.1	Archaeplastida
Zm00001e028087_P001	No alias	RING-v-class E3 ligase	0.09	LandPlants
Zm00001e028087_P001	No alias	RING-v-class E3 ligase	0.09	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR022143	DUF3675	106	212
IPR011016	Znf_RING-CH	55	100

External Links

No external refs found!